PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan013092
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family SRS
Protein Properties Length: 124aa    MW: 13526.8 Da    PI: 9.9835
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-494160996PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF7021203.1e-3736112581
     DUF702   5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.aeaaskrkrelksk 81 
                ++sCqdCGnqakkdC h+RCRtCCksrgf+C+thvkstWvpaakrrerqq l+  +++ ++s+ a ++skr+r   ++
  Aan013092  36 GVSCQDCGNQAKKDCPHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQYLSGGQNDPSHSRrAVSSSKRTRLV-QD 112
                679*************************************************99988887776344555555544.33 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF051422.9E-3336112IPR007818Protein of unknown function DUF702
TIGRFAMsTIGR016234.5E-283880IPR006510Zinc finger, lateral root primordium type 1
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    Send to blast
MGDGSRLINF SDESTWGSAA FVMMGHGGSA SGAGAGVSCQ DCGNQAKKDC PHMRCRTCCK  60
SRGFQCQTHV KSTWVPAAKR RERQQYLSGG QNDPSHSRRA VSSSKRTRLV QDHDQNPNLV  120
RHAX
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012466169.13e-33PREDICTED: protein SHI RELATED SEQUENCE 5-like
SwissprotQ9LQZ57e-31SRS5_ARATH; Protein SHI RELATED SEQUENCE 5
TrEMBLA0A118JVD41e-50A0A118JVD4_CYNCS; Uncharacterized protein
STRINGGLYMA16G24510.26e-32(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75520.11e-30SHI-related sequence 5